approxSilhouette | Approximate silhouette width |
BlusterParam-class | The BlusterParam class |
bootstrapStability | Assess cluster stability by bootstrapping |
clusterRows | Cluster rows of a matrix |
clusterRows-method | Hierarchical clustering |
clusterRows-method | K-means clustering |
clusterRows-method | Graph-based clustering |
clusterRows-method | Two step clustering with vector quantization |
HclustParam | Hierarchical clustering |
HclustParam-class | Hierarchical clustering |
KmeansParam | K-means clustering |
KmeansParam-class | K-means clustering |
makeKNNGraph | Build a nearest-neighbor graph |
makeSNNGraph | Build a nearest-neighbor graph |
mergeCommunities | Merge communities from graph-based clustering |
neighborPurity | Compute neighborhood purity |
neighborsToKNNGraph | Build a nearest-neighbor graph |
neighborsToSNNGraph | Build a nearest-neighbor graph |
NNGraphParam | Graph-based clustering |
NNGraphParam-class | Graph-based clustering |
pairwiseModularity | Compute pairwise modularity |
pairwiseRand | Compute pairwise Rand indices |
show-method | The BlusterParam class |
show-method | Hierarchical clustering |
show-method | K-means clustering |
show-method | Graph-based clustering |
show-method | Two step clustering with vector quantization |
TwoStepParam | Two step clustering with vector quantization |
TwoStepParam-class | Two step clustering with vector quantization |
[[-method | The BlusterParam class |
[[<--method | The BlusterParam class |