Source: cyvcf2
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Steffen Moeller <moeller@debian.org>,
 Liubov Chuprikova <chuprikovalv@gmail.com>,
 Étienne Mollier <emollier@debian.org>,
Section: science
Testsuite: autopkgtest-pkg-python
Build-Depends:
 debhelper-compat (= 14),
 dh-sequence-python3,
 dh-sequence-single-binary,
 zlib1g-dev,
 cmake,
 cython3,
 pybuild-plugin-pyproject,
 python3-setuptools,
 python3-all-dev,
 python3-numpy,
 python3-numpy-dev,
 python3-coloredlogs,
 python3-click,
 python3-scikit-build-core,
 python3-pytest,
 libssl-dev,
 libcurl4-gnutls-dev|libcurl4-openssl-dev,
 libhts-dev,
 libbz2-dev,
 help2man <!nodoc>,
Vcs-Browser: https://salsa.debian.org/med-team/cyvcf2
Vcs-Git: https://salsa.debian.org/med-team/cyvcf2.git
Homepage: https://github.com/brentp/cyvcf2

Package: python3-cyvcf2
Architecture: any
Section: python
Depends:
 ${python3:Depends},
 ${misc:Depends},
 ${shlibs:Depends},
 python3-coloredlogs,
 python3-click,
Description: VCF parser based on htslib (Python 3)
 This modules allows fast parsing of VCF and BCF including region-queries
 with Python. This is essential for efficient analyses of nucleotide
 variation with Python on high-throughput sequencing data.
 .
 cyvcf2 is a cython wrapper around htslib.  Attributes like
 variant.gt_ref_depths return a numpy array directly so they are
 immediately ready for downstream use.
 .
 This package installs the library for Python 3.
